Liverpool have been linked with Jones for some time, and Sunderland boss Steve Bruce hit out at Benitez on Friday for unsettling the player.
And while Benitez insists he did nothing wrong in the pursuit of Jones, he has confirmed that the two clubs are currently discussing a potential deal.
"I was not dealing with this," Benitez said. "(Managing director) Christian Purslow has been talking with (Sunderland chairman) Niall Quinn so they have to manage the situation because I was not doing anything.
"I prefer not to talk too much because we will create a debate so Christian and Niall will continue to talk if they need to talk. They were in contact but I don't know what the situation is now."
It is understood that Liverpool are privately angry at Bruce's comments, particularly as preliminary talks have been taking place between the clubs since last month.